Sequence 1: | NP_648206.1 | Gene: | Cpsf6 / 38937 | FlyBaseID: | FBgn0035872 | Length: | 652 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_758506.3 | Gene: | Cpsf7 / 269061 | MGIID: | 1917826 | Length: | 471 | Species: | Mus musculus |
Alignment Length: | 598 | Identity: | 214/598 - (35%) |
---|---|---|---|
Similarity: | 287/598 - (47%) | Gaps: | 152/598 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 VLDLYAEDLDKDFAGQAQDEFGG-DGVDLYDDIGGPTESAASGGGGGGTPSADGAAG-----PGS 63
Fly 64 GEPGERNSGGPNGVYHQSSGSLTPTMNRRYQLYVGNLTWWTTDQDIANSLRDIGVSDLQEVKFFE 128
Fly 129 NRANGQSKGFSVISLGSESSLRAVLDQLPKKEMHGQAPVVTYPSKQALTQFESLQKTRP-VPPPQ 192
Fly 193 QNGPPRG---PAPPSMGGGPMPTGH--PGGPQGGGPPGHPPRGMNSIMQPGQYRPQHMSQVPQVG 252
Fly 253 GPNSGPPRMQPPMHPQGGLMGNQQPPPRYPSAQGQWPGQRPGGPRPGPPNGPPQRPMFQGGPMGM 317
Fly 318 PVRGPAGPDWRR--PPMHGGFPPQGPPRGLPPAPG--PGGPHGAPAPHVNPAFFNQPGGPAQHPG 378
Fly 379 MGGPPHGAPGPQPGMNMPPQQGMNMTPQHGPPPQFAQHGPRGPWPPPQGKPPGPFPDPQQMGPQL 443
Fly 444 TEVEFEEVMSRNRTVSSSAIARAVSDAAAGEYSSAIETLVTAISLIKQSKVAHDERCKILISSLQ 508
Fly 509 DTLHGIEAKSYNRRERSRSRERSHRSRQRRERSTSRYRERSRERERDRDRERERDGGSYRERSRS 573
Fly 574 RERERQAPDHYRD 586 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cpsf6 | NP_648206.1 | RRM_CFIm68 | 94..170 | CDD:241087 | 36/75 (48%) |
Cpsf7 | NP_758506.3 | RRM | 20..231 | CDD:223796 | 77/245 (31%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 34..68 | 9/43 (21%) | |||
RRM_CFIm59 | 81..170 | CDD:410049 | 41/88 (47%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 176..220 | 11/64 (17%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 409..471 | 27/67 (40%) | |||
Arg/Ser-rich domain. /evidence=ECO:0000250|UniProtKB:Q8N684 | 418..469 | 26/58 (45%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167833660 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4849 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG48498 | |
OrthoDB | 1 | 1.010 | - | - | D1016696at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003643 | |
OrthoInspector | 1 | 1.000 | - | - | otm43515 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR23204 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4521 |
SonicParanoid | 1 | 1.000 | - | - | X2511 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
12 | 11.850 |