Protein Alignment Cpsf6 and SPBC660.15

DIOPT Version :9

• Sequence 1: NP_648206.1
• Gene: Cpsf6 / 38937
• FlyBaseID: FBgn0035872
• Length: 652
• Species: Drosophila melanogaster
• Sequence 2: NP_595094.1
• Gene: SPBC660.15 / 2541150
• PomBaseID: SPBC660.15
• Length: 474
• Species: Schizosaccharomyces pombe
• Alignment Length: 460
• Identity: 94/460 - (20%)
• Similarity: 141/460 - (30%)
• Gaps: 141/460 - (30%)

  Fly    14 DKDFAGQAQDEFGGDGVDLYDDIGGPTESAASGGGGGGTPSADGAAGPGSGEPGERNSGGPNGVY 78
            |.|.:|..|........:..||:...::.|...........|..:|...:.|.|| ||...|  |
pombe    71 DFDRSGSDQQYSAEAEANQEDDLNETSQQAPDPSSYDIRGQALSSATWDNAEDGE-NSKNDN--Y 132

  Fly    79 HQSSGSLT----------------PTMNRRYQLYVGNLTWWTTDQDIANSLRDIGVSDLQEVKFF 127
            :::..:||                |......::::|.|.|.|||..:.:.....|  ::.:....
pombe   133 NENQSALTGSGAMESNEDNAEETSPFNREDGKMFIGGLNWETTDDSLRDYFEQFG--EVLDCTVM 195

  Fly   128 ENRANGQSKGFSVISLGSESSLRAVLDQLPKKEMHGQAPVVTYPSKQALTQFESLQKTRP----- 187
            .:...|:|:||..::..:...:..|:    .||.|....::  ..|:|:.: |..:||..
pombe   196 RDSTTGRSRGFGFLTFKNPKCVNEVM----SKEHHLDGKII--DPKRAIPR-EEQEKTAKMFVGG 253

  Fly   188 VP------------------------PPQQNGPPRG---------PAPPSMGGGPMPTGHPGGPQ 219
            ||                        ..:..|.|||         .|..:....|..|.|
pombe   254 VPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIH----- 313

  Fly   220 GGGP-------PGHPPRGMNSIMQPGQY---RPQHMSQVPQVGGPNSGPPRMQPPMHPQGGLMGN 274
             |.|       |....|..:...|.|.:   .|.:...:...||       |.|.|..|     .
pombe   314 -GKPVEVKRATPKASLRDSHDRHQHGYHGNANPYYAQNMNMYGG-------MTPAMMAQ-----Y 365

  Fly   275 QQPPPRYPSAQGQWPGQRPGGPRPGPPNGPPQRPMFQGGPMGMPVRGPAGPDWRRPPMHGG--FP 337
            .:...:|..|....|......|.|.|..           |.||       .||::....|.  |.
pombe   366 YRQMQQYMEAMRNMPAAAGAVPYPQPVM-----------PAGM-------ADWQQQQQQGAAYFD 412

  Fly   338 P----QGPPRGLPPAP------GPGGPHGAPAPHVNPAFFNQPGGP------AQHPGMGGPPHGA 386
            |    ||...|:|.:|      ..||.||           ..||||      .:..|.||...|.
pombe   413 PSKMNQGTGDGVPFSPSMPSGSSRGGYHG-----------RNPGGPNRQRYRGRRDGRGGNTGGG 466

  Fly   387 PGPQP 391
            ....|
pombe   467 HSFHP 471

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cpsf6	NP_648206.1	RRM_CFIm68	94..170	CDD:241087	15/75 (20%)
SPBC660.15	NP_595094.1	RRM1_Hrp1p	165..240	CDD:241021	17/82 (21%)
		RRM2_Hrp1p	248..322	CDD:240776	12/79 (15%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000