Sequence 1: | NP_648206.1 | Gene: | Cpsf6 / 38937 | FlyBaseID: | FBgn0035872 | Length: | 652 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001367218.1 | Gene: | cfim-2 / 177710 | WormBaseID: | WBGene00008362 | Length: | 491 | Species: | Caenorhabditis elegans |
Alignment Length: | 615 | Identity: | 191/615 - (31%) |
---|---|---|---|
Similarity: | 260/615 - (42%) | Gaps: | 183/615 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 DLYAEDLDKDFAGQAQDEFGGDGVDLYDDIGGPTESAASGGGGGGT------PSADGAAGPGSGE 65
Fly 66 PGERNSGGPNGVYHQSSGSLTPTMNRRYQLYVGNLTWWTTDQDIANSLRDIGV--SDLQEVKFFE 128
Fly 129 NRANGQSKGFSVISLGSESSLRAVLDQLPKKEMHGQAPVVTYPSKQALTQFESLQ-KTRPVPPPQ 192
Fly 193 QNGPPRGPAPPSMG----GGPMPTGHPGGPQGGGPPGHPPRGMNSI------MQPGQYRPQHMSQ 247
Fly 248 VPQVGGPNSGP--PRMQPPMHPQGGLMGNQQPPPRYPSAQGQWPGQRPGGPRPGPPNGPPQRPMF 310
Fly 311 QGGPMGMPVRGPAGPDWRRPPMHGGFPPQGPPRGLPPAPGPGGPHGAPAPHVNPAFFNQPGGPAQ 375
Fly 376 HPGMGGPPHGAPGPQPGMNM-----PPQQGMNMTPQHGPPPQFAQHGPRGPWPPPQGKPPGPFPD 435
Fly 436 PQQMGPQLTEVEFEEVMSRNRTVSSSAIARAVSDAAAGEYSSAIETLVTAISLIKQSKVAHDERC 500
Fly 501 KILISSLQDTLHGIEAKSYNRRERSRSRERSHRSRQRRERSTSRYRERSRERERDRDRERERDGG 565
Fly 566 SYRERSRSRERERQAPDHYRDDSRSVRPRK 595 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Cpsf6 | NP_648206.1 | RRM_CFIm68 | 94..170 | CDD:241087 | 35/77 (45%) |
cfim-2 | NP_001367218.1 | RRM_CFIm68 | 85..163 | CDD:410048 | 35/77 (45%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160157598 | |
Domainoid | 1 | 1.000 | 135 | 1.000 | Domainoid score | I3085 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 211 | 1.000 | Inparanoid score | I2369 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG48498 | |
OrthoDB | 1 | 1.010 | - | - | D1016696at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003643 | |
OrthoInspector | 1 | 1.000 | - | - | oto18980 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR23204 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4521 |
SonicParanoid | 1 | 1.000 | - | - | X2511 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
13 | 13.040 |