DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr66a and Gr28b

DIOPT Version :9

Sequence 1:NP_523971.3 Gene:Gr66a / 38935 FlyBaseID:FBgn0035870 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_995642.1 Gene:Gr28b / 117496 FlyBaseID:FBgn0045495 Length:470 Species:Drosophila melanogaster


Alignment Length:545 Identity:105/545 - (19%)
Similarity:206/545 - (37%) Gaps:159/545 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QPLLQQFQQ-------------LFFISKIAGILPQDLEKF-------RSRNLLEKSRNGMIYMLS 53
            |||.::|::             :|.::.|.|     |..|       ..:..::|:..|.|..:.
  Fly    26 QPLRRRFRRFVTAKQLYECLRPVFHVTYIHG-----LTSFYISCDTKTGKKAIKKTIFGYINGIM 85

  Fly    54 TLILYVVLYNILIYSFGEEDRSLKASQSTLTFVIGLFLTYIGLIMMVSD--------QLTALRNQ 110
            .:.::|..|::.||:         ..:|..::.....:||.|.:|.:..        .|||....
  Fly    86 HIAMFVFAYSLTIYN---------NCESVASYFFRSRITYFGDLMQIVSGFIGVTVIYLTAFVPN 141

  Fly   111 GRIGELYERIRLVDERLYKEGCVMDNSTIGRRIRIMLIMTVIFELSILVSTY-VKLVDYSQWMSL 174
            .|:....::...:|.:|         .|:|  ::||....:.|...:|:|.: |.::......|:
  Fly   142 HRLERCLQKFHTMDVQL---------QTVG--VKIMYSKVLRFSYMVLISMFLVNVLFTGGTFSV 195

  Fly   175 LWIVSAIP------TFINTLDKIWFAVSL-----YALKERFEAINATLEELVDTHEKHKLWLRGN 228
            |:.....|      ||:.....|..|::|     |.::.|...:|..|:.|..            
  Fly   196 LYSSEVAPTMALHFTFLIQHTVIAIAIALFSCFTYLVEMRLVMVNKVLKNLAH------------ 248

  Fly   229 QEVPPPLDSSQPPQYDSNLEYLYKELGGMDIGSIGKSSVSGSGKNKVAPVAHSMNSFGEAIDAAS 293
                         |:|:.                     |....|:.......::||  ::....
  Fly   249 -------------QWDTR---------------------SLKAVNQKQRSLQCLDSF--SMYTIV 277

  Fly   294 RKPPPPPLATNMVHESELGNAAKVEEKLNNLCQVHDEICEIGKALNELWSYPILSLMAYGFLIFT 358
            .|.|     ..::.||               .::|..|||.....|:.::|.:|::::..|||..
  Fly   278 TKDP-----AEIIQES---------------MEIHHLICEAAATANKYFTYQLLTIISIAFLIIV 322

  Fly   359 AQLYFLYCATQYQSIPSLFRSAK--NPFITVIVLSYTSGKCVYLIYL---------SWKTSQASK 412
            ...|::        :.:|...:|  :.|.||..:::.|  |..::||         |.:..:.|:
  Fly   323 FDAYYV--------LETLLGKSKRESKFKTVEFVTFFS--CQMILYLIAIISIVEGSNRAIKKSE 377

  Fly   413 RTGISLHKCGVVADDNLLYEIVNHLSLKLLNHSVDFSACGFFTLDMETLYGVSGGITSYLIILIQ 477
            :||..:|..........:.|.:...|::|::..::|:|.|.|.:|....:.:||.:|:|||||:|
  Fly   378 KTGGIVHSLLNKTKSAEVKEKLQQFSMQLMHLKINFTAAGLFNIDRTLYFTISGALTTYLIILLQ 442

  Fly   478 F-----NLAAQQAKEAIQTFNSLND 497
            |     |..........:|||::.:
  Fly   443 FTSNSPNNGYGNGSSCCETFNNMTN 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr66aNP_523971.3 7tm_7 21..478 CDD:285581 94/494 (19%)
Gr28bNP_995642.1 7tm_7 45..443 CDD:285581 95/500 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450268
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2C1WA
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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