DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbp2 and secisbp2l

DIOPT Version :10

Sequence 1:NP_648204.1 Gene:Sbp2 / 38934 FlyBaseID:FBgn0087039 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001164297.1 Gene:secisbp2l / 733798 XenbaseID:XB-GENE-988601 Length:1078 Species:Xenopus tropicalis


Alignment Length:369 Identity:92/369 - (24%)
Similarity:153/369 - (41%) Gaps:90/369 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KITPRSSKYKNQHRKREQQTSLLDFVIKPRPKTQRQTKAHKLQKTH-LAITRGSYIVYKPK---- 78
            |:....||...:..|...|..|.| ::....:.|:..||.::..|. |:.|.||.:.:..|    
 Frog   463 KLQEALSKASGKKSKTPVQLDLGD-MLAELERQQQAMKARQITNTRPLSYTVGSAVPFHIKEHTN 526

  Fly    79 --------------------------GKTRLDPK-KKITRLKKSVRVYRTSKKAEREVAENDLEG 116
                                      ||.:..|| |:.|.|||.:...|..||..          
 Frog   527 RNVFTKAQAVMGSPNPLDSTAPRVKRGKEKEVPKLKRPTALKKIILKEREEKKGR---------- 581

  Fly   117 VPVVGQDINPNAIPLEQQVQNLSL----------------------SKTPAPNN----------- 148
            :||     :|:.:..|:|...||.                      |.:||..|           
 Frog   582 LPV-----DPSVLGSEEQKDALSFADDQSEELASQEEAGLSAPSDTSLSPASQNSPYCMTPVSQG 641

  Fly   149 ---------PSQAKTVHAIHSRRFRSYCDNCTRPRLKELSTQLLRDLDRFQKRAFAKNEIKARAH 204
                     |....|:..|||:|||.||:......:.|..|.||::|..||:|.:.|:.:||::.
 Frog   642 SPASSGIGSPMATSTLTKIHSKRFREYCNQVLSKEIDECVTVLLQELVSFQERVYQKDPVKAKSK 706

  Fly   205 PRLVLGVREALARLRINKVKLLFLATDCEICPGESGLDATIEGLKFQCQQQQVPYCFPLLRRELS 269
            .|||:|:||....:::||:|.:.::.:||....:.|||..:..:....::|::|:.|.|.|:.|.
 Frog   707 RRLVMGLREVTKHMKLNKIKCVIISPNCEKIQSKGGLDEALYNVIAMAREQEIPFVFALGRKALG 771

  Fly   270 YALQKRAQICCVAILDFDGANATYADLLNEIEDARAEYKRRTAS 313
            ..:.|...:..|.|..:.||.:.:.:|::..|:||..||...:|
 Frog   772 RCVNKLVPVSVVGIFSYSGAESLFHNLVSLTEEARKAYKDMVSS 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sbp2NP_648204.1 Ribosomal_L7Ae 200..290 CDD:426153 26/89 (29%)
secisbp2lNP_001164297.1 Ribosomal_L7Ae 693..795 CDD:426153 29/101 (29%)

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