DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbp2 and Secisbp2l

DIOPT Version :10

Sequence 1:NP_648204.1 Gene:Sbp2 / 38934 FlyBaseID:FBgn0087039 Length:313 Species:Drosophila melanogaster
Sequence 2:XP_038960483.1 Gene:Secisbp2l / 296115 RGDID:1559930 Length:1093 Species:Rattus norvegicus


Alignment Length:354 Identity:92/354 - (25%)
Similarity:150/354 - (42%) Gaps:60/354 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KITPRSSKYKNQHRKREQQTSLLDFVIKPRPKTQRQTKAHKLQKT----HLAITRGSYIVYKPKG 79
            |:....||...:..|...|..|.| ::....|.|:..||.::..|    |..:|.|::.......
  Rat   474 KLQEALSKAAGKKNKTPVQLDLGD-MLAALEKQQQAMKARQITNTRPLAHPVVTTGTFHTKDSNR 537

  Fly    80 K--TRLDP-------------------------KKKITRLKKSVRVYRTSKKAE----------R 107
            |  ||..|                         .|:.|.|||.:...|..||..          .
  Rat   538 KTLTRSQPCLTSFNSLDITSSKAKKGKEKEIAKLKRPTALKKVILKEREEKKGRLTVEHSVLGAE 602

  Fly   108 EVAE------NDLEGVPVVGQDIN---PNAIPLEQQVQNLSLSKTPAP---------NNPSQAKT 154
            |:.|      |||....:..:|..   |:...|....||.....||..         .:|..:.|
  Rat   603 ELTETNLDLANDLPQETISQEDTGLSMPSDASLSPASQNSPYCMTPVSQGSPASSGIGSPMASST 667

  Fly   155 VHAIHSRRFRSYCDNCTRPRLKELSTQLLRDLDRFQKRAFAKNEIKARAHPRLVLGVREALARLR 219
            :..|||:|||.||:......:.|..|.||::|..||:|.:.|:.::|:|..|||:|:||....::
  Rat   668 ITKIHSKRFREYCNQVLSKEIDECVTLLLQELVSFQERIYQKDPVRAKARRRLVMGLREVTKHMK 732

  Fly   220 INKVKLLFLATDCEICPGESGLDATIEGLKFQCQQQQVPYCFPLLRRELSYALQKRAQICCVAIL 284
            :||:|.:.::.:||....:.|||..:..:....::|::|:.|.|.|:.|...:.|...:..|.|.
  Rat   733 LNKIKCVIISPNCEKIQSKGGLDEALYNVIAMAREQEIPFVFALGRKALGRCVNKLVPVSVVGIF 797

  Fly   285 DFDGANATYADLLNEIEDARAEYKRRTAS 313
            ::.||.:.:..|:...|:||..||...|:
  Rat   798 NYFGAESLFNRLVELTEEARKAYKDMVAA 826

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sbp2NP_648204.1 Ribosomal_L7Ae 200..290 CDD:426153 26/89 (29%)
Secisbp2lXP_038960483.1 Ribosomal_L7Ae 704..806 CDD:426153 29/101 (29%)

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