DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbp2 and scbp-2

DIOPT Version :10

Sequence 1:NP_648204.1 Gene:Sbp2 / 38934 FlyBaseID:FBgn0087039 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001370117.1 Gene:scbp-2 / 172588 WormBaseID:WBGene00010569 Length:153 Species:Caenorhabditis elegans


Alignment Length:140 Identity:39/140 - (27%)
Similarity:64/140 - (45%) Gaps:15/140 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 DNCTRPRLKELSTQLLRDLDRFQKRAFAKNEIKARAHPRLVLGVREALARLRINKVKLLFLATDC 232
            ||.....:|.|.:|  :|.:| :..|..||.:|.    |::.|..|.|...:..:|||:|.|.:.
 Worm    12 DNLAFELIKRLKSQ--QDKNR-KGNADEKNFLKR----RVICGAHETLKFAQSGRVKLIFYAKNM 69

  Fly   233 EICPGESGLDA--TIEGLKFQCQQQQVPYCFPLLRRELSYALQKRAQICCVAILDFDGANATYAD 295
            :    |:.|.|  ....|:..|....:|....|.|:|||..:.|...:..|.::||.|......|
 Worm    70 D----ENNLRAASNFHSLQIVCPLAGIPMIEVLTRKELSRIMNKFPYVAVVGVIDFSGFERETED 130

  Fly   296 LLN--EIEDA 303
            ::.  :|.|:
 Worm   131 IVKNWKIHDS 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sbp2NP_648204.1 Ribosomal_L7Ae 200..290 CDD:426153 26/91 (29%)
scbp-2NP_001370117.1 Rpl7Ae 42..124 CDD:440969 24/89 (27%)

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