DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sbp2 and secisbp2

DIOPT Version :10

Sequence 1:NP_648204.1 Gene:Sbp2 / 38934 FlyBaseID:FBgn0087039 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_001090731.1 Gene:secisbp2 / 100036714 XenbaseID:XB-GENE-1004872 Length:561 Species:Xenopus tropicalis


Alignment Length:279 Identity:89/279 - (31%)
Similarity:126/279 - (45%) Gaps:53/279 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 KGKTRLDPK-KKITRLKKSVRVYRTSKKAEREVAENDL-----------EGVPVVGQDINPN--- 127
            |||.|..|| ||.|.|||.:...|..:|.....|..:|           .|.||  |.|:|:   
 Frog   218 KGKQREVPKAKKPTSLKKIILKEREERKQRLTSATQELTPQGSHILSDGAGPPV--QSISPSEGD 280

  Fly   128 -AIPL--------EQQVQNLSLSKT------PAPNN----PSQA-KTVHAIHSRRFRSYC----- 167
             ..||        |..|::|.|..:      |...:    |.|: ..:..|||||||.||     
 Frog   281 CLGPLETALAEIQEDSVEDLILGNSEISAIQPVTESTVSLPQQSTSNLPKIHSRRFREYCSQVLS 345

  Fly   168 ---DNCTRPRLKELSTQLLRDLDRFQKRAFAKNEIKARAHPRLVLGVREALARLRINKVKLLFLA 229
               |||.        .:||::|.|||.|.|.|...||::..|||:|:||.|..|::.|:|.:.::
 Frog   346 KDVDNCV--------MELLKELVRFQDRLFLKEPAKAKSKRRLVMGLREVLKHLKLQKLKCIIIS 402

  Fly   230 TDCEICPGESGLDATIEGLKFQCQQQQVPYCFPLLRRELSYALQKRAQICCVAILDFDGANATYA 294
            .:||....:.|||.|::.:.....:|.||:.|.|.|:.|...|.|...:..|.:..:|||...:.
 Frog   403 PNCEKIQSKGGLDDTLQTIISHACEQNVPFVFALNRKALGRCLNKAVPVSVVGVFSYDGAQDHFH 467

  Fly   295 DLLNEIEDARAEYKRRTAS 313
            .|......||..||...|:
 Frog   468 KLCELTVQARQAYKDMIAA 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sbp2NP_648204.1 Ribosomal_L7Ae 200..290 CDD:426153 30/89 (34%)
secisbp2NP_001090731.1 Ribosomal_L7Ae 369..464 CDD:426153 32/94 (34%)

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