DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl5 and ARL1

DIOPT Version :9

Sequence 1:NP_648201.1 Gene:Arl5 / 38931 FlyBaseID:FBgn0035866 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_009723.3 Gene:ARL1 / 852462 SGDID:S000000368 Length:183 Species:Saccharomyces cerevisiae


Alignment Length:183 Identity:87/183 - (47%)
Similarity:128/183 - (69%) Gaps:6/183 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLLLS----RLWRMFGNEEHKLVMVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEVVWRNIH 61
            ||.:.|    :||.  .|:|.:::::|||.||||||||:..:.|||.|.||||.|||.:.::|:.
Yeast     1 MGNIFSSMFDKLWG--SNKELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYKNLK 63

  Fly    62 FLVWDLGGQQSLRAAWSTYYTNTELVIMVIDSTDRERLAVTREELYRMLQHEDLSKASLLVYANK 126
            ..|||||||.|:|..|..||.:|..||.|:||||::|::...:||:.|||.|:|..|:|||:|||
Yeast    64 LNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANK 128

  Fly   127 QDLKGSMSAAEISRQLDLTSIKKHQWHIQACCALTGEGLYQGLEWIVQRIKNK 179
            ||..|::||:|:|::|:|..:|...|.|.|..|:.|||:.:||:|::..||.:
Yeast   129 QDQPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVIKEE 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl5NP_648201.1 Arl5_Arl8 3..175 CDD:133353 83/175 (47%)
ARL1NP_009723.3 Arl1 20..177 CDD:206718 78/156 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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