DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl5 and Arl13a

DIOPT Version :10

Sequence 1:NP_648201.1 Gene:Arl5 / 38931 FlyBaseID:FBgn0035866 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_083223.1 Gene:Arl13a / 74448 MGIID:1921698 Length:372 Species:Mus musculus


Alignment Length:191 Identity:48/191 - (25%)
Similarity:89/191 - (46%) Gaps:22/191 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLSRLWRMFGNEEHK-----LVMVGLDNAGKTTIL--YQFLMNEVVHTS--PTIGSNVEEVVWRN 59
            ||:..|......|.|     ::::||||:||:.::  :|.|:...:|..  ||    ...::..:
Mouse     4 LLTACWSRQKTTEEKQRNVTIIVIGLDNSGKSRLIEAFQRLIPSKMHKEMRPT----QTTLLLDD 64

  Fly    60 IHFLVWDLGGQQSLRAAWSTYYTNTELVIMVIDSTDRERLAVTREELYRMLQHEDLSKASLLVYA 124
            ....::||.|....|..||:||.....:|.|:||:|..|:...:..|.|::..:.:|...:|:.|
Mouse    65 YQVSIYDLTGDVKGREKWSSYYAQAHGLIFVVDSSDIARIQEVKIILTRIMFDKRVSGKPILILA 129

  Fly   125 NKQDLKGSMSAAEISRQL---DLTSIKKHQWHIQACCAL------TGEGLYQGLEWIVQRI 176
            ||||.|.::...:|...|   .|.:..:....::.|..:      ..:.:..||.|::..|
Mouse   130 NKQDKKNALLPCDIIEYLLLERLVNETRSMCRVEPCSTIKRIPKRQQKPIVVGLRWLLAAI 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl5NP_648201.1 Arl5_Arl8 3..175 CDD:133353 47/188 (25%)
Arl13aNP_083223.1 Arl2l1_Arl13_like 23..189 CDD:133361 42/169 (25%)

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