DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl5 and Arl6

DIOPT Version :9

Sequence 1:NP_648201.1 Gene:Arl5 / 38931 FlyBaseID:FBgn0035866 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001334173.1 Gene:Arl6 / 56297 MGIID:1927136 Length:193 Species:Mus musculus


Alignment Length:184 Identity:72/184 - (39%)
Similarity:112/184 - (60%) Gaps:13/184 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLL--LSRLWRMFGNEEHKLVMVGLDNAGKTTILYQF-----LMNEVVHTSPTIGSNVEEVVWR 58
            ||||  ||.|..:...|.|.|.: ||||:|||||:.:.     ...::|   ||||.::|:....
Mouse     1 MGLLDRLSGLLGLKKKEVHVLCL-GLDNSGKTTIINKLKPSNAQSQDIV---PTIGFSIEKFKSS 61

  Fly    59 NIHFLVWDLGGQQSLRAAWSTYYTNTELVIMVIDSTDRERLAVTREELYRMLQHEDLS--KASLL 121
            ::.|.|:|:.||...|..|..||.:.:.:|.||||:|:.|:.|.:|||..:|.|.|:.  :..:|
Mouse    62 SLSFTVFDMSGQGRYRNLWEHYYKDGQAIIFVIDSSDKLRMVVAKEELDTLLNHPDIKHRRIPIL 126

  Fly   122 VYANKQDLKGSMSAAEISRQLDLTSIKKHQWHIQACCALTGEGLYQGLEWIVQR 175
            .:|||.||:.|:::.::|:.|.|.|||...|||.|..|:.||||.:|::|:.::
Mouse   127 FFANKMDLRDSVTSVKVSQLLCLESIKDKPWHICASDAIKGEGLQEGVDWLQEK 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl5NP_648201.1 Arl5_Arl8 3..175 CDD:133353 70/180 (39%)
Arl6NP_001334173.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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