DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl5 and arl4a

DIOPT Version :9

Sequence 1:NP_648201.1 Gene:Arl5 / 38931 FlyBaseID:FBgn0035866 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001006711.1 Gene:arl4a / 448350 XenbaseID:XB-GENE-5783083 Length:200 Species:Xenopus tropicalis


Alignment Length:164 Identity:62/164 - (37%)
Similarity:100/164 - (60%) Gaps:6/164 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LVMVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEVV-----WRNIHFLVWDLGGQQSLRAAWS 78
            :.::|||.|||||:||:...||.|:|.||.|.|.|::.     .:.:.|..||:|||:.||..|.
 Frog    23 IAILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNAEKIKVSLGNSKTVTFHFWDVGGQEKLRPLWK 87

  Fly    79 TYYTNTELVIMVIDSTDRERLAVTREELYRMLQHEDLSKASLLVYANKQDLKGSMSAAEISRQLD 143
            :|...|:.::.|:||.|.||:...:.||:::.:..:.....:|:.||||||:.|::.:||.:.|.
 Frog    88 SYTRCTDGIVFVVDSVDAERMEEAKTELHKITKISENQGVPVLIVANKQDLRNSLTLSEIEKLLA 152

  Fly   144 LTSI-KKHQWHIQACCALTGEGLYQGLEWIVQRI 176
            |... ....||:||.||:.|:||.:|:|.:.:.|
 Frog   153 LNEFGSSTPWHLQATCAIIGDGLREGIEKLYEMI 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl5NP_648201.1 Arl5_Arl8 3..175 CDD:133353 61/161 (38%)
arl4aNP_001006711.1 Arl4_Arl7 18..200 CDD:206719 62/164 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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