DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl5 and arl4cb

DIOPT Version :9

Sequence 1:NP_648201.1 Gene:Arl5 / 38931 FlyBaseID:FBgn0035866 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_998413.1 Gene:arl4cb / 406531 ZFINID:ZDB-GENE-040426-2382 Length:192 Species:Danio rerio


Alignment Length:172 Identity:75/172 - (43%)
Similarity:107/172 - (62%) Gaps:14/172 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LVMVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEVVWRN-------IHFLVWDLGGQQSLRAA 76
            :||:|||:|||||:||:...||.|:|.||||.|.|::...|       .||  ||:|||:.||..
Zfish    16 IVMLGLDSAGKTTVLYRLKFNEFVNTVPTIGFNTEKIKLSNGTAKGISCHF--WDVGGQEKLRPL 78

  Fly    77 WSTYYTNTELVIMVIDSTDRERLAVTREELYRMLQHEDLSKASLLVYANKQDLKGSMSAAEISRQ 141
            |.:|...|:.:|.|:||.|.:||...:.||:::.:..:.....|||.||||||..|:|.|:|.:|
Zfish    79 WKSYSRCTDGIIYVVDSVDVDRLEEAKTELHKVTKFAENQGTPLLVIANKQDLPKSLSVADIEKQ 143

  Fly   142 LDLTSI-KKHQWHIQACCALTGEGLYQGL----EWIVQRIKN 178
            |.|..: ....:|||..||:.||||::|:    |.||:|.|:
Zfish   144 LALQELTPATTYHIQPACAIIGEGLHEGMDKLYEMIVKRRKS 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl5NP_648201.1 Arl5_Arl8 3..175 CDD:133353 73/167 (44%)
arl4cbNP_998413.1 Arl4_Arl7 11..192 CDD:206719 75/172 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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