DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arl5 and arl10

DIOPT Version :10

Sequence 1:NP_648201.1 Gene:Arl5 / 38931 FlyBaseID:FBgn0035866 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_989044.1 Gene:arl10 / 394641 XenbaseID:XB-GENE-945631 Length:237 Species:Xenopus tropicalis


Alignment Length:151 Identity:53/151 - (35%)
Similarity:88/151 - (58%) Gaps:20/151 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EHKLVMVGLDNAGKTTILYQFLMNEVVHTS-PTIGSNVEEVVWRNIHFLVWDLGGQQSLRAAWST 79
            :.:::::|||.|||::|::....|....:| ||.|.|..:::.:.:...:.::||.|:||..||.
 Frog    45 DRQILVLGLDGAGKSSIIHAISTNTTRSSSAPTHGFNSAQIIHQGLRIELLEVGGSQNLRTYWSQ 109

  Fly    80 YYTNTELVIMVIDSTDRERLAVTREELYRMLQHE--DLSKASLLVYANKQDLKGSMSAAEISRQL 142
            |..|..:::.|:||||.:||.:.|:||:|:| ||  ||   .|:|.|||||...::...||..:|
 Frog   110 YLKNANVIVFVVDSTDNKRLHLARQELHRLL-HEAPDL---PLMVLANKQDQNTALCLPEIHSEL 170

  Fly   143 DLTSIKKHQWHIQACCALTGE 163
            .|     |:        :|||
 Frog   171 SL-----HR--------ITGE 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl5NP_648201.1 Arl5_Arl8 3..175 CDD:133353 53/151 (35%)
arl10NP_989044.1 P-loop containing Nucleoside Triphosphate Hydrolases 47..210 CDD:476819 53/149 (36%)

Return to query results.
Submit another query.