DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arl5 and arl10

DIOPT Version :9

Sequence 1:NP_648201.1 Gene:Arl5 / 38931 FlyBaseID:FBgn0035866 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_989044.1 Gene:arl10 / 394641 XenbaseID:XB-GENE-945631 Length:237 Species:Xenopus tropicalis


Alignment Length:151 Identity:53/151 - (35%)
Similarity:88/151 - (58%) Gaps:20/151 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EHKLVMVGLDNAGKTTILYQFLMNEVVHTS-PTIGSNVEEVVWRNIHFLVWDLGGQQSLRAAWST 79
            :.:::::|||.|||::|::....|....:| ||.|.|..:::.:.:...:.::||.|:||..||.
 Frog    45 DRQILVLGLDGAGKSSIIHAISTNTTRSSSAPTHGFNSAQIIHQGLRIELLEVGGSQNLRTYWSQ 109

  Fly    80 YYTNTELVIMVIDSTDRERLAVTREELYRMLQHE--DLSKASLLVYANKQDLKGSMSAAEISRQL 142
            |..|..:::.|:||||.:||.:.|:||:|:| ||  ||   .|:|.|||||...::...||..:|
 Frog   110 YLKNANVIVFVVDSTDNKRLHLARQELHRLL-HEAPDL---PLMVLANKQDQNTALCLPEIHSEL 170

  Fly   143 DLTSIKKHQWHIQACCALTGE 163
            .|     |:        :|||
 Frog   171 SL-----HR--------ITGE 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl5NP_648201.1 Arl5_Arl8 3..175 CDD:133353 53/151 (35%)
arl10NP_989044.1 P-loop_NTPase 47..210 CDD:328724 53/149 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.