DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl5 and TRIM23

DIOPT Version :10

Sequence 1:NP_648201.1 Gene:Arl5 / 38931 FlyBaseID:FBgn0035866 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001647.1 Gene:TRIM23 / 373 HGNCID:660 Length:574 Species:Homo sapiens


Alignment Length:165 Identity:71/165 - (43%)
Similarity:111/165 - (67%) Gaps:7/165 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EHKLVMVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEVVWRNIHFLVWDLGGQQSLRAAWSTY 80
            |.::|.:|||.|||||||::...:|.:...||||.|||.|.::|:.|.:||:||:..||..|..|
Human   404 EIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHY 468

  Fly    81 YTNTELVIMVIDSTDRERLAVTREELYRMLQHEDLSKASLLVYANKQDLKGSMSAAEISRQLDLT 145
            |.||:.|:.|:||:.|:|::....||.::|..::|..|.||::|||||:.|::|..||:   :|.
Human   469 YLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEIT---ELL 530

  Fly   146 SIKK----HQWHIQACCALTGEGLYQGLEWIVQRI 176
            |:.|    ..|:||.|.|.:|.|||:||:|:.:::
Human   531 SLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQL 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl5NP_648201.1 Arl5_Arl8 3..175 CDD:133353 71/162 (44%)
TRIM23NP_001647.1 mRING-HC-C3HC3D_TRIM23_C-IX 28..77 CDD:438307
Bbox2_TRIM23_C-IX_rpt1 123..172 CDD:380831
Bbox2_TRIM23_C-IX_rpt2 174..223 CDD:380832
BBC 226..370 CDD:128778
ARF-like 390..574 71/165 (43%)
ARD1 406..574 CDD:206723 70/163 (43%)
Blue background indicates that the domain is not in the aligned region.

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