DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl5 and arl-8

DIOPT Version :10

Sequence 1:NP_648201.1 Gene:Arl5 / 38931 FlyBaseID:FBgn0035866 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_502791.1 Gene:arl-8 / 178405 WormBaseID:WBGene00000192 Length:185 Species:Caenorhabditis elegans


Alignment Length:176 Identity:52/176 - (29%)
Similarity:92/176 - (52%) Gaps:17/176 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MFGNEEHKLVMVGLDNAGKTTILY-----QFLMNEVVHTSPTIGSNVEEVVWRNIHFLVWDLGGQ 70
            :|..||.:|.:|||.|:||||.:.     ||..:.:    ||:|.|:.::...|:...:||:|||
 Worm    15 LFWKEEMELTLVGLQNSGKTTFVNVIASGQFTEDMI----PTVGFNMRKITKGNVTIKLWDIGGQ 75

  Fly    71 QSLRAAWSTYYTNTELVIMVIDSTDRERLAVTREELYRMLQHEDLSKASLLVYANKQDLKGSMSA 135
            ...|:.|..|......::.::|:.|.|:|..:|.||.::|....|....:||..||:||.|::..
 Worm    76 PRFRSMWERYCRGVNAIVFMVDAADEEKLEASRNELMQLLDKPQLDAIPVLVLGNKKDLPGALDE 140

  Fly   136 AEISRQLDLTSIKKHQWHIQACC----ALTGEGLYQGLEWIVQRIK 177
            .::..:::|:||:..    :.||    ....|.:...|:|::...|
 Worm   141 RQLIERMNLSSIQNR----EICCYSISCKEKENIDITLQWLIDHSK 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl5NP_648201.1 Arl5_Arl8 3..175 CDD:133353 51/172 (30%)
arl-8NP_502791.1 Arl10_like 22..180 CDD:206724 48/165 (29%)

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