DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl5 and Arl4a

DIOPT Version :10

Sequence 1:NP_648201.1 Gene:Arl5 / 38931 FlyBaseID:FBgn0035866 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_031513.1 Gene:Arl4a / 11861 MGIID:99437 Length:200 Species:Mus musculus


Alignment Length:169 Identity:65/169 - (38%)
Similarity:103/169 - (60%) Gaps:10/169 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LVMVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEVV-----WRNIHFLVWDLGGQQSLRAAWS 78
            :|::|||.|||||:||:...||.|:|.||.|.|.|::.     .:.:.|..||:|||:.||..|.
Mouse    23 IVILGLDCAGKTTVLYRLQFNEFVNTVPTKGFNTEKIKVTLGNSKTVTFHFWDVGGQEKLRPLWK 87

  Fly    79 TYYTNTELVIMVIDSTDRERLAVTREELYRMLQHEDLSKASLLVYANKQDLKGSMSAAEISRQLD 143
            :|...|:.::.|:||.|.||:...:.||:::.:..:.....:|:.||||||:.|:|.:||.:.|.
Mouse    88 SYTRCTDGIVFVVDSVDVERMEEAKTELHKITRISENQGVPVLIVANKQDLRNSLSLSEIEKLLA 152

  Fly   144 LTSIKKH-QWHIQACCALTGEGLYQGLE----WIVQRIK 177
            :..:... .||:|..||:.|:||.:|||    .|::|.|
Mouse   153 MGELSSSTPWHLQPTCAIIGDGLKEGLEKLHDMIIKRRK 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl5NP_648201.1 Arl5_Arl8 3..175 CDD:133353 63/165 (38%)
Arl4aNP_031513.1 Arl4_Arl7 18..200 CDD:206719 65/169 (38%)

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