DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl5 and Arl5a

DIOPT Version :10

Sequence 1:NP_648201.1 Gene:Arl5 / 38931 FlyBaseID:FBgn0035866 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_446431.1 Gene:Arl5a / 117050 RGDID:621327 Length:179 Species:Rattus norvegicus


Alignment Length:177 Identity:129/177 - (72%)
Similarity:158/177 - (89%) Gaps:0/177 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLLLSRLWRMFGNEEHKLVMVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEVVWRNIHFLVW 65
            ||:|.:|:||:|.::|||:::|||||||||||||||.|||||||||||||||||:|..|..||:|
  Rat     1 MGILFTRIWRLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNNTRFLMW 65

  Fly    66 DLGGQQSLRAAWSTYYTNTELVIMVIDSTDRERLAVTREELYRMLQHEDLSKASLLVYANKQDLK 130
            |:|||:|||::|:|||||||.||:|:|||||||::|||||||:||.||||.||.||::|||||:|
  Rat    66 DIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVK 130

  Fly   131 GSMSAAEISRQLDLTSIKKHQWHIQACCALTGEGLYQGLEWIVQRIK 177
            ..|:.||||:.|.|||||.||||||||||||||||.|||||::.|:|
  Rat   131 ECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRLK 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl5NP_648201.1 Arl5_Arl8 3..175 CDD:133353 125/171 (73%)
Arl5aNP_446431.1 Arl5_Arl8 3..175 CDD:133353 125/171 (73%)

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