DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and RAB3D

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_004274.1 Gene:RAB3D / 9545 HGNCID:9779 Length:219 Species:Homo sapiens


Alignment Length:207 Identity:82/207 - (39%)
Similarity:128/207 - (61%) Gaps:12/207 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EEHFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAG 79
            :::||::||::|||:...|||..:.|:...::.....:|:|:||.:||:....|:||||||||||
Human    16 DQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAG 80

  Fly    80 QERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREV 144
            |||:||||.:|||.|.|.|::|||..:.||:.:|.|..:::.|:..|..:||||||||||::|.|
Human    81 QERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVV 145

  Fly   145 DFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDANNVEEVPENTITLGQGKPL 209
            ..|:.|::...:....|  |.|||||:||:..|..|.:.:..:  .|...|...::.:.|:|..:
Human   146 PAEDGRRLADDLGFEFF--EASAKENINVKQVFERLVDVICEK--MNESLEPSSSSGSNGKGPAV 206

  Fly   210 --------KSCS 213
                    .|||
Human   207 GDAPAPQPSSCS 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 74/164 (45%)
RAB3DNP_004274.1 Rab3 22..186 CDD:206657 73/165 (44%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P63012 49..58 2/8 (25%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P63012 80..96 11/15 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..219 6/29 (21%)

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