DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab19 and RAB11A

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_004654.1 Gene:RAB11A / 8766 HGNCID:9760 Length:216 Species:Homo sapiens


Alignment Length:212 Identity:89/212 - (41%)
Similarity:133/212 - (62%) Gaps:18/212 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EEHFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAG 79
            ::.:|:|||:|||||.|.||:.::.||....:.....:||||:|:.::|.|:||.||.|||||||
Human     5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 69

  Fly    80 QERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREV 144
            |||:|.||.:|||.|.|.|:||||.|..::.|:::|::|:|.:..||::|:|||||.||...|.|
Human    70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 134

  Fly   145 DFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLANEL-----------KRQHD---ANNVEE 195
            ..:|||...:  ...|..:||||.::.|||.||:.:..|:           :|::|   :|||  
Human   135 PTDEARAFAE--KNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSNNV-- 195

  Fly   196 VPENTITLGQGKPLKSC 212
            ||.:.....:.||...|
Human   196 VPIHVPPTTENKPKVQC 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 78/164 (48%)
RAB11ANP_004654.1 Rab11_like 9..173 CDD:206660 79/165 (48%)

Return to query results.
Submit another query.