DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and YPT31

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_010948.1 Gene:YPT31 / 856753 SGDID:S000000833 Length:223 Species:Saccharomyces cerevisiae


Alignment Length:200 Identity:87/200 - (43%)
Similarity:120/200 - (60%) Gaps:18/200 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQER 82
            :|.|||||||||.|.||:.::.||....:.....:||||:|:.:|:.::||:||.||||||||||
Yeast    10 YDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQER 74

  Fly    83 FRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFE 147
            :|.||.:|||.|.|.||||||:|.||:.|...|:.|:|.....||.:.|:|||.||...|.|..|
Yeast    75 YRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTE 139

  Fly   148 EARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDANNVEEVPENTITLGQGKPLKSC 212
            |::...|. .::||. ||||..:.||:.||..|.|.:        .::|.::.:.||        
Yeast   140 ESKTFAQE-NQLLFT-ETSALNSENVDKAFEELINTI--------YQKVSKHQMDLG-------- 186

  Fly   213 SSSCN 217
            .||.|
Yeast   187 DSSAN 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 81/164 (49%)
YPT31NP_010948.1 Rab11_like 11..175 CDD:206660 81/173 (47%)

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