DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab19 and YPT7

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_013713.1 Gene:YPT7 / 855012 SGDID:S000004460 Length:208 Species:Saccharomyces cerevisiae


Alignment Length:202 Identity:68/202 - (33%)
Similarity:121/202 - (59%) Gaps:11/202 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQI-KLQIWDTAGQERFR 84
            :.|::::||.|.|||.::.|:....|.:::..|||.||..|.:.|:|.:: .:|:|||||||||:
Yeast     8 ILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQ 72

  Fly    85 TITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASN----VLIILVGNKCDLEEQREVD 145
            ::..::||.|:..::|||:|..|||.|::.|.:|...:...|    ...:::|||.|.||.:::.
Yeast    73 SLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKKIV 137

  Fly   146 FEE-ARQMCQYIPEI-LFVMETSAKENMNVEDAFRCLANELKRQHDANN--VEEVPENTITLGQG 206
            .|: |:::.:.:.:| ||:  ||||..:||:.||..:|....:|:.|:.  .|:...:.|.:...
Yeast   138 SEKSAQELAKSLGDIPLFL--TSAKNAINVDTAFEEIARSALQQNQADTEAFEDDYNDAINIRLD 200

  Fly   207 KPLKSCS 213
            ....|||
Yeast   201 GENNSCS 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 61/169 (36%)
YPT7NP_013713.1 Rab7 9..182 CDD:206655 62/174 (36%)

Return to query results.
Submit another query.