DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and Rab9a

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_445910.2 Gene:Rab9a / 84589 RGDID:619740 Length:201 Species:Rattus norvegicus


Alignment Length:205 Identity:74/205 - (36%)
Similarity:113/205 - (55%) Gaps:24/205 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQERFRT 85
            ||||:|:||.|.||:.:::|:.|..:..:..:||||:|..|.:.|:|..:.:||||||||||||:
  Rat     7 LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRS 71

  Fly    86 ITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYT----ASNVLIILVGNKCDLEEQREVDF 146
            :...:||.::..|:.:.:....||.||..|.:|...|.    ..:...:::|||.|::| |:|..
  Rat    72 LRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKTDIKE-RQVST 135

  Fly   147 EEARQMCQYIPEILFVMETSAKENMNVEDAF-----RCLANELKRQH----DANNVEEVPENTIT 202
            |||:..|:...:..: .|||||::.||..||     |.||.|.:..|    |..|:...|     
  Rat   136 EEAQAWCKDNGDYPY-FETSAKDSTNVAAAFEEAVRRILATEDRSDHLIQTDTVNLHRKP----- 194

  Fly   203 LGQGKPLKSC 212
                ||..||
  Rat   195 ----KPNSSC 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 65/171 (38%)
Rab9aNP_445910.2 Rab9 3..172 CDD:206697 62/166 (37%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P51151 31..42 2/10 (20%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P51151 64..78 7/13 (54%)

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