DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and AT5G59840

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_200792.1 Gene:AT5G59840 / 836105 AraportID:AT5G59840 Length:216 Species:Arabidopsis thaliana


Alignment Length:209 Identity:92/209 - (44%)
Similarity:133/209 - (63%) Gaps:15/209 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQER 82
            :|:|.|::||||.|.||:|::.||..|::......|||:||.::||.::||:|||||||||||||
plant    12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 76

  Fly    83 FRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEE-QREVDF 146
            |||||.:|||.|.|:|:|||:|..|||:|::.||..:.::.:.||..||||||.|::| :|.|..
plant    77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPK 141

  Fly   147 EEARQMC-QYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDANNVEEVPENTITL------- 203
            .:.:.:. :|  .|.| .|||||.|:|||:.|..:|.::| |..|:........||.:       
plant   142 SKGQALADEY--GIKF-FETSAKTNLNVEEVFFSIAKDIK-QRLADTDSRAEPATIKISQTDQAA 202

  Fly   204 --GQGKPLKSCSSS 215
              ||.....:|..|
plant   203 GAGQATQKSACCGS 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 83/166 (50%)
AT5G59840NP_200792.1 Rab8_Rab10_Rab13_like 13..180 CDD:206659 84/170 (49%)

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