DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and RABA2c

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_190267.1 Gene:RABA2c / 823836 AraportID:AT3G46830 Length:217 Species:Arabidopsis thaliana


Alignment Length:216 Identity:93/216 - (43%)
Similarity:130/216 - (60%) Gaps:19/216 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EEHFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAG 79
            ::.:|:|||||||||.|.||:.|:.||....:.....:||||:|:.:|..||||.||.|||||||
plant     6 DQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAG 70

  Fly    80 QERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREV 144
            |||:|.||.:|||.|.|.|:|||||||.:|.|:.:|:.|:|.:..||::|::.|||.||...|.|
plant    71 QERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSV 135

  Fly   145 DFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLANEL-----KRQHDANNVEEVPENTITLG 204
            ..|:.:.:.:  .|.|..:||||.|..|||.||:.:..|:     |:...|.  |....|:...|
plant   136 AEEDGQSLAE--KEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQ--EAAAANSAIPG 196

  Fly   205 QGKPL----------KSCSSS 215
            ||..:          ::|.||
plant   197 QGTTINVDDTSGGAKRACCSS 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 82/164 (50%)
RABA2cNP_190267.1 PLN03110 1..217 CDD:178657 91/214 (43%)

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