DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and RABA1g

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_188124.1 Gene:RABA1g / 820735 AraportID:AT3G15060 Length:217 Species:Arabidopsis thaliana


Alignment Length:214 Identity:86/214 - (40%)
Similarity:135/214 - (63%) Gaps:17/214 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EEHFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAG 79
            ::.:|||:|:|||||.|.||:.::.||....:.....:||||:|:.::|.|:.|.:|.|||||||
plant     7 DDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAG 71

  Fly    80 QERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREV 144
            |||:|.||.:|||.|.|.|:|||:|:..:|.|:::|::|:|.:|.:|::|:|||||.||...|.|
plant    72 QERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADLRHLRAV 136

  Fly   145 DFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDANNVEEVPENTITLGQG--- 206
            ..|:|:...:  .|..|.|||||.|.:|||:||..:.:::.|. .:....::.::..||.:|   
plant   137 STEDAKAFAE--RENTFFMETSALEALNVENAFTEVLSQIYRV-ASKKALDIGDDHTTLPKGQSI 198

  Fly   207 -----------KPLKSCSS 214
                       |.:..|||
plant   199 NVGSKDDVSEVKKVGCCSS 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 78/164 (48%)
RABA1gNP_188124.1 Rab11_like 11..175 CDD:206660 78/165 (47%)

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