DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and Rab13

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_112354.1 Gene:Rab13 / 81756 RGDID:620880 Length:203 Species:Rattus norvegicus


Alignment Length:199 Identity:88/199 - (44%)
Similarity:133/199 - (66%) Gaps:5/199 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQER 82
            :|.|||::||||.|.||||::.||...|:...:.:|||:||.::|:.:|||:||||:||||||||
  Rat     5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQER 69

  Fly    83 FRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFE 147
            |:|||.:|||.|.|:::|||||...||.|:|.|::.::...::.|..:|:|||||:|.:|:|..|
  Rat    70 FKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQRE 134

  Fly   148 EARQMCQYIPEILFVMETSAKENMNVEDAFRCLANE--LKRQHDANNVEEVPENT-ITLGQGKPL 209
            :|.::.:. ..|.| .|||||.::||::||..||.:  ||.....:.....|.:| :.:...|..
  Rat   135 QAERLARE-HRIRF-FETSAKSSVNVDEAFSSLARDILLKTGGRRSGNSSKPSSTDLKVSDKKNS 197

  Fly   210 KSCS 213
            ..||
  Rat   198 NKCS 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 81/166 (49%)
Rab13NP_112354.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 81/167 (49%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 4/13 (31%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 13/16 (81%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..203 5/29 (17%)

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