DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and RAB7A

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_565521.1 Gene:RAB7A / 816724 AraportID:AT2G21880 Length:212 Species:Arabidopsis thaliana


Alignment Length:180 Identity:61/180 - (33%)
Similarity:104/180 - (57%) Gaps:12/180 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQERFRT 85
            |.|::::||.|.|||.:::::....:.:::..|||.||..|.:.::.|.:.||||||||||||::
plant     9 LLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWDTAGQERFQS 73

  Fly    86 ITQSYYRSANGVLIVYDITKRSSFSNLQKW----IEEVRRYTASNVLIILVGNKCDLE--EQREV 144
            :..::||.|:..::|||:....||..|..|    :::...........:|:|||.|::  ..|.|
plant    74 LGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFVLIGNKTDVDGGNSRVV 138

  Fly   145 DFEEARQMCQYIPEILFVMETSAKENMNVEDAFR-----CLANELKRQHD 189
            ..:.|.:.|.....|.: .||||||:.|:::||.     .|:||.|:.:|
plant   139 SNKRAIEWCGSKGNIPY-HETSAKEDTNIDEAFLSVAHIALSNERKQSND 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 58/173 (34%)
RAB7ANP_565521.1 Rab7 10..181 CDD:206655 56/171 (33%)

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