DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and RAB3A

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_002857.1 Gene:RAB3A / 5864 HGNCID:9777 Length:220 Species:Homo sapiens


Alignment Length:169 Identity:74/169 - (43%)
Similarity:115/169 - (68%) Gaps:2/169 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 NEEHFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTA 78
            ::::||::|||::||:...|||..:.|:...::.....:|:|:||.:|||....|:|||||||||
Human    15 SDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTA 79

  Fly    79 GQERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQRE 143
            ||||:||||.:|||.|.|.:::||||...||:.:|.|..:::.|:..|..::|||||||:|::|.
Human    80 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERV 144

  Fly   144 VDFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLAN 182
            |..|..||:..::....|  |.|||:|:||:..|..|.:
Human   145 VSSERGRQLADHLGFEFF--EASAKDNINVKQTFERLVD 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 73/164 (45%)
RAB3ANP_002857.1 Rab3 22..186 CDD:206657 72/162 (44%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P63012 49..58 2/8 (25%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P63012 80..96 11/15 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..220
Blue background indicates that the domain is not in the aligned region.

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