DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and rab23

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001016964.1 Gene:rab23 / 549718 XenbaseID:XB-GENE-492626 Length:238 Species:Xenopus tropicalis


Alignment Length:238 Identity:74/238 - (31%)
Similarity:118/238 - (49%) Gaps:37/238 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EEHFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAG 79
            ||..:...|:|::|:...||:.::.|:..|.:.:.:..||||||..:.|.:..:.::|.:|||||
 Frog     3 EEDMEVAIKVVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQLNDEDVRLMLWDTAG 67

  Fly    80 QERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREV 144
            ||.|..||::|||.|...::|:..|.|.||..:..|.|:|.. ...::..:||.||.||.::..:
 Frog    68 QEEFDAITKAYYRGAQACVLVFSTTDRESFETIPSWREKVVA-EVGDIPTVLVQNKIDLLDETVI 131

  Fly   145 DFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLANE----LKRQ-HDANNVEEVPENTITL- 203
            ..|||..:.:.:.  |....||.||::||.:.|:.||::    |||| .:.|.|.....|.|.: 
 Frog   132 KNEEAEALAKRLK--LRFYRTSVKEDLNVTEVFKYLADKYLQRLKRQTAEDNEVVHTTSNKIGVF 194

  Fly   204 ----------------GQG------------KPLKSCSSSCNL 218
                            |.|            |..||..::|||
 Frog   195 NTAGGSHSGQKTNGLNGSGDVINLRPNKQRTKKTKSPFTNCNL 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 56/168 (33%)
rab23NP_001016964.1 Rab23_like 22..169 CDD:133306 52/149 (35%)

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