DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and Rab25

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_058595.2 Gene:Rab25 / 53868 MGIID:1858203 Length:213 Species:Mus musculus


Alignment Length:195 Identity:76/195 - (38%)
Similarity:122/195 - (62%) Gaps:6/195 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EEHFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAG 79
            :|.::|:||:||||:.|.|||.::.||....:......||||:||.:|:.:....:|.|||||||
Mouse     6 DEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAG 70

  Fly    80 QERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREV 144
            .||:|.||.:|||.|.|.|:|:|:||..:::.:::|::|:..:..:.::::|||||.||.:.|||
Mouse    71 LERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREV 135

  Fly   145 DFEEARQMCQYIPE--ILFVMETSAKENMNVEDAFRCLANELKRQHDANNVEEVPENTITLGQGK 207
            ..|||   |.:...  :|| :||||.::.|||.||:.:..|:..:...........:.||||..:
Mouse   136 PTEEA---CMFAENNGLLF-LETSALDSTNVELAFQTVLKEIFAKVSKQKQNSTRTSAITLGNAQ 196

  Fly   208  207
            Mouse   197  196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 70/166 (42%)
Rab25NP_058595.2 Rab11_like 11..174 CDD:206660 71/166 (43%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 35..49 4/13 (31%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 67..84 11/16 (69%)

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