DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and Rab19

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001019497.1 Gene:Rab19 / 500088 RGDID:1565263 Length:217 Species:Rattus norvegicus


Alignment Length:202 Identity:95/202 - (47%)
Similarity:141/202 - (69%) Gaps:17/202 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EEHFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAG 79
            :|:.|:|||::||||...||||:|..||:|.|.|...|||||||:::::.::||::|:|:|||||
  Rat    11 DENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAG 75

  Fly    80 QERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREV 144
            |||||||||||||||:..:|.||:|:||:|.::..||.|:.:|.|:|::|:|:|||.||.|:|.|
  Rat    76 QERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHV 140

  Fly   145 DFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDANNVEEVPENTITL-----G 204
            .||:|..:.:.. .:|.|:||||||:.|:::.|..:|.||           :..|::.|     .
  Rat   141 LFEDACTLAEKY-GLLAVLETSAKESRNIDEVFVLMAKEL-----------IARNSLHLYGESAQ 193

  Fly   205 QGKPLKS 211
            ||.|..|
  Rat   194 QGLPQDS 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 86/164 (52%)
Rab19NP_001019497.1 Rab19 15..179 CDD:133267 86/163 (53%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 39..54 8/14 (57%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 74..89 14/14 (100%)

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