DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and rab34

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001006769.1 Gene:rab34 / 448455 XenbaseID:XB-GENE-494108 Length:259 Species:Xenopus tropicalis


Alignment Length:208 Identity:63/208 - (30%)
Similarity:106/208 - (50%) Gaps:28/208 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQERFRTIT 87
            |::::||...||||:::||....:.:.:..||||||.|:...:.|....||:|||||||||:.|.
 Frog    54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDFEMERFEILGVPFSLQLWDTAGQERFKCIA 118

  Fly    88 QSYYRSANGVLIVYDITKRSSFSNLQKWIEE-VRRYTASNVLIILVGNKCDLEEQREVDFEE--- 148
            .:|||.|..::|.:|:|..||..:.::|::: ::....|:.|:.|||:|.||....:....|   
 Frog   119 STYYRGAQAIIIAFDLTDVSSLEHTKQWLQDALKENDPSSALLFLVGSKKDLSPPAQYALMEKDA 183

  Fly   149 ---ARQM-CQYIPEILFVMETSAKENMNVEDAFRCLAN---------ELKRQHDANNVEEVPENT 200
               |::| .:|       ...|:....||::.|..:|:         ||::    .|...:.|..
 Frog   184 IKVAKEMQAEY-------WSVSSLTGENVKEFFFRVASLTFESSVLAELEK----TNARRIGEVV 237

  Fly   201 ITLGQGKPLKSCS 213
            ......:.|..||
 Frog   238 RINSNDRNLYQCS 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 56/177 (32%)
rab34NP_001006769.1 Rab36_Rab34 53..219 CDD:206693 56/171 (33%)

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