DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and RabX1

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_524713.1 Gene:RabX1 / 44172 FlyBaseID:FBgn0015372 Length:261 Species:Drosophila melanogaster


Alignment Length:198 Identity:70/198 - (35%)
Similarity:106/198 - (53%) Gaps:17/198 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KIVLIGDCGTGKTCIVDRF--KTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQERFRT 85
            |::::|..|.|||.:|.|:  .|.:..|....||.|.|....|.::..:|||||||||||||:|.
  Fly     7 KVLVLGSRGVGKTRLVIRYIKNTLHRKESEVPTIAVSFFTCNIILDEVKIKLQIWDTAGQERYRA 71

  Fly    86 ITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFEEAR 150
            :...|||:||..::|:|:|:..:|:.::.||:|:.|.....:::.|||||.|::.||.|..|||.
  Fly    72 VAPMYYRNANAAILVFDLTQYKTFTEIKSWIQELHRNVQDPMILTLVGNKMDMQAQRAVSREEAF 136

  Fly   151 QMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDANNVEEVPENTITLGQGKPLKSCSSS 215
            .....|....|  |||.:.:..:|..|...|..|.|..|.             |:...|:|..|:
  Fly   137 VFATSIGATYF--ETSTETDQGLEQVFISTAQGLVRLADE-------------GKSPSLRSFQST 186

  Fly   216 CNL 218
            .:|
  Fly   187 DSL 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 62/162 (38%)
RabX1NP_524713.1 Rab 7..166 CDD:206640 61/160 (38%)

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