DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and rab11bb

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001002555.1 Gene:rab11bb / 436828 ZFINID:ZDB-GENE-040718-293 Length:218 Species:Danio rerio


Alignment Length:215 Identity:90/215 - (41%)
Similarity:133/215 - (61%) Gaps:17/215 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EEHFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAG 79
            ::.:|||||:|||||.|.||:.::.||....:.....:||||:|:.::|.|:||.||.|||||||
Zfish     5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 69

  Fly    80 QERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREV 144
            |||:|.||.:|||.|.|.|:||||.|..::.|:::|::|:|.:..:|::|:|||||.||...|.|
Zfish    70 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAV 134

  Fly   145 DFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKR-----------QHD---ANNVEE 195
            ..:|||...:  ...|..:||||.::.|||:||:.:..|:.|           .||   .|||.:
Zfish   135 PTDEARAFAE--KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAERSAHDESPGNNVVD 197

  Fly   196 VPENTITLGQ-GKPLKSCSS 214
            :.....|.|| ...|:.|.:
Zfish   198 ISVPPTTDGQKSNKLQCCQN 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 78/164 (48%)
rab11bbNP_001002555.1 Rab11_like 9..173 CDD:206660 79/165 (48%)

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