DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and RAB44

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:XP_054211399.1 Gene:RAB44 / 401258 HGNCID:21068 Length:1027 Species:Homo sapiens


Alignment Length:198 Identity:66/198 - (33%)
Similarity:115/198 - (58%) Gaps:9/198 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQERF 83
            |:||.::.:||...|||..:......::......|:||||.:||:.|:.|...||:||||||||:
Human   837 DYLFHVIFLGDSNVGKTSFLHLLHQNSFATGLTATVGVDFRVKTLLVDNKCFVLQLWDTAGQERY 901

  Fly    84 RTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFEE 148
            .::|:...|.|:||:::||||.:.||::::.|::.::...:..|:|:|:|||.|.||:|:|..|.
Human   902 HSMTRQLLRKADGVVLMYDITSQESFAHVRYWLDCLQDAGSDGVVILLLGNKMDCEEERQVSVEA 966

  Fly   149 ARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDANNVEEVPENTITLGQGKPLK--S 211
            .:|:.|.:.  ::..|.||....|:.:....||..|:.|.     |.:.::.:.:...:|.|  .
Human   967 GQQLAQELG--VYFGECSAALGHNILEPVVNLARSLRMQE-----EGLKDSLVKVAPKRPPKRFG 1024

  Fly   212 CSS 214
            |.|
Human  1025 CCS 1027

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 59/164 (36%)
RAB44XP_054211399.1 FRQ1 <44..110 CDD:444056
COG4372 191..>339 CDD:443500
PHA03247 <326..653 CDD:223021
PRK07764 <529..837 CDD:236090 66/198 (33%)
Rab 840..998 CDD:206640 56/159 (35%)
Blue background indicates that the domain is not in the aligned region.

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