DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and Rab4

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_523777.1 Gene:Rab4 / 36992 FlyBaseID:FBgn0016701 Length:213 Species:Drosophila melanogaster


Alignment Length:143 Identity:36/143 - (25%)
Similarity:54/143 - (37%) Gaps:28/143 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 LLRAPLKMESGALSGKWNRDTAGYIILYCLPMLAL--------QLAVVLSESRLNGGSG-SYVKL 175
            |:.|.|...:..:..:|..:|:   |.|....||.        .||.|....||.|.:. ...::
  Fly    17 LIAAELLRPAYPIEVRWGNETS---ISYATRTLACITNNDVLRALARVAPGLRLYGETPIERTQI 78

  Fly   176 PHDFTRTYSRVIIDHDEVAL---CTYPL-------LSTILLGVFAAVLTAYLFWLGRQILKLVIN 230
            .|..|.|.|......||:..   |..||       |:...|.||..:...|     .|:.|:.|.
  Fly    79 DHWLTYTLSMEKDPSDELKYLNKCLGPLTYLVANHLTIADLAVFNELYVRY-----EQLKKIGIP 138

  Fly   231 KRLQKRVYTLIFS 243
            :.:| |.|.|:.:
  Fly   139 QHVQ-RWYNLMLA 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 18/72 (25%)
Rab4NP_523777.1 Rab4 9..169 CDD:206696 36/143 (25%)

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