DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and Rab2

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster


Alignment Length:212 Identity:90/212 - (42%)
Similarity:132/212 - (62%) Gaps:15/212 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQER 82
            :.:|||.::|||.|.||:|::.:|....:...|..||||:|..:.|.::|||||||||||||||.
  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67

  Fly    83 FRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFE 147
            ||:||:||||.|.|.|:|||||:|.:|::|..|:|:.|:::.||::|:|:|||.||:.:|||..|
  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132

  Fly   148 EARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQ---------HDANNV----EEVPEN 199
            |.....:  ...|..|||||:...|||:||...|.|:..:         ::||.:    :..|.|
  Fly   133 EGEAFAR--EHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPTN 195

  Fly   200 TITLGQGKPLKSCSSSC 216
            ....|.|....:.:|.|
  Fly   196 PSLPGAGGAAGAANSGC 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 81/164 (49%)
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 90/212 (42%)

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