DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and Rab6

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_477172.1 Gene:Rab6 / 34636 FlyBaseID:FBgn0015797 Length:208 Species:Drosophila melanogaster


Alignment Length:171 Identity:71/171 - (41%)
Similarity:108/171 - (63%) Gaps:2/171 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQERFRTI 86
            ||:|.:|:...|||.::.||...::...:..|||:||..||:.:|.:.::||:||||||||||::
  Fly    13 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 77

  Fly    87 TQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFEEARQ 151
            ..||.|.:...::|||||..:||....|||::||....|:|:|:|||||.||.::|:|..||..:
  Fly    78 IPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGER 142

  Fly   152 MCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDANN 192
            ..:.: .::|: |||||...||:..||.:|..|.......|
  Fly   143 KAKEL-NVMFI-ETSAKAGYNVKQLFRRVAAALPGMDSTEN 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 69/161 (43%)
Rab6NP_477172.1 Rab6 13..173 CDD:206654 69/161 (43%)

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