DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and rab5aa

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_958893.1 Gene:rab5aa / 337737 ZFINID:ZDB-GENE-030131-139 Length:216 Species:Danio rerio


Alignment Length:197 Identity:74/197 - (37%)
Similarity:115/197 - (58%) Gaps:6/197 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQERFRTI 86
            ||:||:|:...||:.:|.||..|.:.|...:|||..|..:|:.::...:|.:|||||||||:.::
Zfish    22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSL 86

  Fly    87 TQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFEEARQ 151
            ...|||.|...::|||||...||:..:.|::|::|..:.|::|.|.|||.||..:|.|||::|:.
Zfish    87 APMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQDAQS 151

  Fly   152 MCQYIPEILFVMETSAKENMNVEDAFRCLANEL-KRQHDANNVEEVPENTITLGQ-GKPLKS--C 212
            ...  ...|..||||||.:|||.:.|..:|.:| |.:..|..........:.|.: .:|.|:  |
Zfish   152 YAD--DNSLLFMETSAKTSMNVNEIFMAIAKKLPKSEPQAAGANSGRSRGVDLTETAQPTKAPCC 214

  Fly   213 SS 214
            |:
Zfish   215 SN 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 66/161 (41%)
rab5aaNP_958893.1 Rab5_related 21..183 CDD:206653 66/162 (41%)

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