DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and Rab5

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_523457.1 Gene:Rab5 / 33418 FlyBaseID:FBgn0014010 Length:219 Species:Drosophila melanogaster


Alignment Length:195 Identity:80/195 - (41%)
Similarity:114/195 - (58%) Gaps:11/195 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQERFRTI 86
            ||:||:|:...||:.:|.||..|.:.|...:|||..|..:||.:|...:|.:|||||||||:.::
  Fly    30 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSL 94

  Fly    87 TQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFEEARQ 151
            ...|||.|...::||||..:.||...:.|::|:.:..:.|::|.|.|||.||...|.|:|:||: 
  Fly    95 APMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIRVVEFDEAK- 158

  Fly   152 MCQYIPE--ILFVMETSAKENMNVEDAFRCLANELKRQHDANN--VEEVPENTITLGQGKPLKSC 212
              ||..|  :|| ||||||..|||.|.|..:|.:|.:...|||  ....|..|.|   .:|..:|
  Fly   159 --QYAEENGLLF-METSAKTGMNVNDIFLAIAKKLPKNDGANNQGTSIRPTGTET---NRPTNNC 217

  Fly   213  212
              Fly   218  217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 71/163 (44%)
Rab5NP_523457.1 Rab5_related 29..191 CDD:206653 71/164 (43%)

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