DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and Rab35

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_608373.1 Gene:Rab35 / 33014 FlyBaseID:FBgn0031090 Length:201 Species:Drosophila melanogaster


Alignment Length:203 Identity:85/203 - (41%)
Similarity:131/203 - (64%) Gaps:12/203 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FDFLFKIVLIGDCGTGKTCIVDRFK----TGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTA 78
            ||.|||:::|||.|.||:.::.||.    :|:||    .||||||.::|:.:||.::||||||||
  Fly     5 FDHLFKLLIIGDSGVGKSSLLIRFSDDTFSGSYI----TTIGVDFKIRTVDIEGMRVKLQIWDTA 65

  Fly    79 GQERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQRE 143
            |||||||||.:|||..:||::|||:|...||:|:::|:||::. ....|..:|||||.|..:::.
  Fly    66 GQERFRTITSTYYRGTHGVIVVYDVTNGESFANVRRWLEEIQN-NCDVVKKVLVGNKNDDPDRKV 129

  Fly   144 VDFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDANNVEEVPENTITLGQGKP 208
            |..|:|::..:.:...||  |||||:|:|||:.|..:..::.......:..|..::|:.| :..|
  Fly   130 VITEDAQRFAKQMDIELF--ETSAKDNINVENMFLSITRQVLDHKLRTSPNEQQKDTLHL-KPNP 191

  Fly   209 LKSCSSSC 216
            ..|....|
  Fly   192 KGSKGGKC 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 78/168 (46%)
Rab35NP_608373.1 Rab35 3..201 CDD:133310 85/203 (42%)

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