DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and Rab9Fb

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster


Alignment Length:212 Identity:80/212 - (37%)
Similarity:125/212 - (58%) Gaps:15/212 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQER 82
            :|:||||:::||.|.||:|::.||....:.|:|..|:|:||.::.:.:.|:.:.||||||||.||
  Fly     4 YDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68

  Fly    83 FRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFE 147
            |:::..||||.|:|:|:|||||...||.|:..|::|:||.::.:|.::|||||||..:.|:|..|
  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRME 133

  Fly   148 EARQMCQYIPEILFVMETSAKENMNVEDAFRCLA------------NELKRQHDANNVEEVPENT 200
            :......:  ..|...|.|||...||.|.|..|:            |.|....:..:..|.|:..
  Fly   134 QGFNYANH--RALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDEP 196

  Fly   201 ITL-GQGKPLKSCSSSC 216
            |.| |:.:.....|::|
  Fly   197 INLAGKDRQRAKDSNTC 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 72/176 (41%)
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 68/158 (43%)

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