DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and RabX2

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster


Alignment Length:176 Identity:68/176 - (38%)
Similarity:108/176 - (61%) Gaps:2/176 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 HFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQE 81
            |||:|||::::||.|.||:|::.||....:.|::..|:|:|...:::.:..:.:.||:|||:|.:
  Fly     3 HFDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDK 67

  Fly    82 RFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDF 146
            ||.::..|.||||:|:|:|||||...||.|:..|::|:||.....|.::|||||.|....|:|..
  Fly    68 RFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSM 132

  Fly   147 EEARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDANN 192
            |:......  ...|...|.|||..|||.|.|..||.::..::..:|
  Fly   133 EQGFNYAH--RGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHN 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 65/164 (40%)
RabX2NP_572627.1 Rab 8..165 CDD:206640 61/158 (39%)

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