DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and RAB18

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001243339.1 Gene:RAB18 / 22931 HGNCID:14244 Length:235 Species:Homo sapiens


Alignment Length:235 Identity:83/235 - (35%)
Similarity:119/235 - (50%) Gaps:49/235 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIW------------ 75
            ||::||:.|.||:.::.||....:......||||||.:|||:|:|.:.||.||            
Human    10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVTLHQQTANFFL 74

  Fly    76 -----------------DTAGQERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRY- 122
                             ||||||||||:|.||||.|.||::|||:|:|.:|..|..|:.|:..| 
Human    75 KSQIGNSPILKWAMWQYDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYC 139

  Fly   123 TASNVLIILVGNKCDLEEQREVDFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLAN----- 182
            |.::::.:|||||.| :|.||||..|..:..:. ..:||: |.|||....|:.||..|..     
Human   140 TRNDIVNMLVGNKID-KENREVDRNEGLKFARK-HSMLFI-EASAKTCDGVQCAFEELVEKIIQT 201

  Fly   183 ----ELKRQHDANNVEEVPENTITLGQGKPLKSCSSSCNL 218
                |.:.|:....:....|     |||.  .:|...|::
Human   202 PGLWESENQNKGVKLSHREE-----GQGG--GACGGYCSV 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 75/199 (38%)
RAB18NP_001243339.1 Rab18 9..198 CDD:206656 75/190 (39%)

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