DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and Rab5b

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_803130.1 Gene:Rab5b / 19344 MGIID:105938 Length:215 Species:Mus musculus


Alignment Length:170 Identity:66/170 - (38%)
Similarity:104/170 - (61%) Gaps:2/170 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQERFRTI 86
            ||:||:|:...||:.:|.||..|.:.|...:|||..|..:::.::...:|.:|||||||||:.::
Mouse    21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSL 85

  Fly    87 TQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFEEARQ 151
            ...|||.|...::|||||.:.:|:..:.|::|::|..:.:::|.|.|||.||..:|.|::|||:.
Mouse    86 APMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQA 150

  Fly   152 MCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDAN 191
            ...  ...|..||||||..|||.|.|..:|.:|.:....|
Mouse   151 YAD--DNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQN 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 64/161 (40%)
Rab5bNP_803130.1 Rab5_related 20..182 CDD:206653 64/162 (40%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20339 44..56 4/11 (36%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20339 77..93 8/15 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..215 1/3 (33%)

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