DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and Rab19

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_035356.1 Gene:Rab19 / 19331 MGIID:103292 Length:217 Species:Mus musculus


Alignment Length:173 Identity:90/173 - (52%)
Similarity:133/173 - (76%) Gaps:5/173 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 NEEHFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTA 78
            ::|:.|:|||::||||...||||:|..||:|.|.|...|||||||:::::.::||::|:|:||||
Mouse    10 SDENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTA 74

  Fly    79 GQERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQRE 143
            ||||||||||||||||:..:|.||:|:||:|.::..||.|:.:|.|:|::|:|:|||.||.|:|.
Mouse    75 GQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRH 139

  Fly   144 VDFEEARQMCQYIPE--ILFVMETSAKENMNVEDAFRCLANEL 184
            |.||:|   |....:  :|.|:||||||:.|:::.|..:|.||
Mouse   140 VLFEDA---CTLAEKHGLLAVLETSAKESRNIDEVFVLMAKEL 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 87/166 (52%)
Rab19NP_035356.1 Rab19 15..179 CDD:133267 87/165 (53%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 39..54 8/14 (57%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 74..89 14/14 (100%)

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