DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and Rab12

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_077768.3 Gene:Rab12 / 19328 MGIID:894284 Length:291 Species:Mus musculus


Alignment Length:190 Identity:77/190 - (40%)
Similarity:125/190 - (65%) Gaps:1/190 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQERF 83
            ||..::::||..|.|||.:::||....:.|...:|:||||.:||:.:.||:|:||||||||||||
Mouse    87 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERF 151

  Fly    84 RTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFEE 148
            .:||.:|||||.|:::||||||:.:|.:|.||::.:.:|.:.:..::|||||.|.|..||:..::
Mouse   152 NSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREISRQQ 216

  Fly   149 ARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDANNVEEVPENTITLGQGKP 208
            ..:..|.|..:.| .|.|||:|.||::.|..|.:::.::...:.:.....|:|...|.:|
Mouse   217 GEKFAQQITGMRF-CEASAKDNFNVDEIFLKLVDDILKKMPLDVLRNELSNSILSLQPEP 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 73/164 (45%)
Rab12NP_077768.3 Rab12 90..291 CDD:206699 75/187 (40%)

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