DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and rabr-2

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001255966.1 Gene:rabr-2 / 181797 WormBaseID:WBGene00007067 Length:395 Species:Caenorhabditis elegans


Alignment Length:191 Identity:72/191 - (37%)
Similarity:108/191 - (56%) Gaps:27/191 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAV-EGKQIKLQIWDTAGQER 82
            |.:||:|.:||...||||.:.||....:......||||||::||:.: ..:.|.:|:||||||||
 Worm   200 DRIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWDTAGQER 264

  Fly    83 FRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDL--------- 138
            ||:||:.|:|.|:||::::|:|...||.|::.||:.||.......::.|||||.||         
 Worm   265 FRSITKQYFRKADGVVLMFDVTSEQSFLNVRNWIDSVRAGVDDATVMCLVGNKMDLFGSDIARSA 329

  Fly   139 ----EEQREVDFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDANNVEE 195
                .|:..|:|:        ||    ..||||.....::...|.:|..|:|:.| |::||
 Worm   330 VYRAAEKLAVEFK--------IP----FFETSAYTGFGIDTCMRQMAENLQRRED-NHLEE 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 66/178 (37%)
rabr-2NP_001255966.1 Rab 203..365 CDD:206640 64/173 (37%)

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