DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab19 and rab-6.2

DIOPT Version :10

Sequence 1:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_510790.1 Gene:rab-6.2 / 181759 WormBaseID:WBGene00004270 Length:205 Species:Caenorhabditis elegans


Alignment Length:182 Identity:74/182 - (40%)
Similarity:115/182 - (63%) Gaps:4/182 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 FKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQERFRTI 86
            ||:|.:|:...|||.::.||...::...:..|||:||..||:.:|.:.::||:||||||||||::
 Worm    11 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 75

  Fly    87 TQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDFEEARQ 151
            ..||.|.:...::|||||..:||....|||::||....|:|:|:|||||.||.::|:|..:|..:
 Worm    76 IPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVTTDEGER 140

  Fly   152 MCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDANNVEEVPENTITL 203
            ..:.: .::|: |||||...||:..||.:|..|......:.||  |.|.:|:
 Worm   141 KAKEL-NVMFI-ETSAKAGYNVKQLFRRIAGALPGIIKDDPVE--PPNVVTM 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab19NP_523970.1 Rab19 19..184 CDD:133267 68/161 (42%)
rab-6.2NP_510790.1 Rab6 11..171 CDD:206654 68/161 (42%)

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